selected publications
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academic article
- Genome wide analysis of 3' UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish.. Genome research. 29:1100-1114. 2019
- Brd4 and P300 Confer Transcriptional Competency during Zygotic Genome Activation.. Developmental Cell. 49:867-881.e8. 2019
- Optimized CRISPR-Cpf1 system for genome editing in zebrafish.. Methods. 150:11-18. 2018
- Analyses of mRNA structure dynamics identify embryonic gene regulatory programs.. Nature Structural Biology Nature Structural & Molecular Biology. 25:677-686. 2018
- CRISPR-Cpf1 mediates efficient homology-directed repair and temperature-controlled genome editing.. Nat Commun. 8:2024. 2017
- RESA identifies mRNA-regulatory sequences at high resolution.. Nature Methods. 14:201-207. 2017
- Codon identity regulates mRNA stability and translation efficiency during the maternal-to-zygotic transition.. EMBO Journal. 35:2087-2103. 2016
- Optimization Strategies for the CRISPR-Cas9 Genome-Editing System.. Cold Spring Harb Protoc. 2016:pdb.top090894-pdb.top090894. 2016
- Optimized CRISPR-Cas9 System for Genome Editing in Zebrafish.. Cold Spring Harb Protoc. 2016:pdb.prot086850-pdb.prot086850. 2016
- CRISPRscan: designing highly efficient sgRNAs for CRISPR-Cas9 targeting in vivo.. Nature Methods. 12:982-988. 2015
- Identification of small ORFs in vertebrates using ribosome footprinting and evolutionary conservation.. EMBO Journal. 33:981-993. 2014